It kind-of applies to the Bernoulli-sigmoid-linear case that would usually be applied to binary diagnoses (but only because of sample size issues and because they usually perform the regression one variable at a time to reduce computational difficulty), but it doesn’t apply as strongly as it does to the polynomial case, and it doesn’t apply to the purely linear (or exponential-linear) case at all.
If you have a purely linear case, then the expected slope of a genetic variant onto an outcome of interest is proportional to the effect of the genetic variant.
The issue is in the polynomial case, the effect size of one genetic variant depends on the status of other genetic variants within the same term in the sum. Statistics gives you a sort of average effect size, but that average effect size is only going to be accurate for the people with the most common kind of depression.
It kind-of applies to the Bernoulli-sigmoid-linear case that would usually be applied to binary diagnoses (but only because of sample size issues and because they usually perform the regression one variable at a time to reduce computational difficulty), but it doesn’t apply as strongly as it does to the polynomial case, and it doesn’t apply to the purely linear (or exponential-linear) case at all.
If you have a purely linear case, then the expected slope of a genetic variant onto an outcome of interest is proportional to the effect of the genetic variant.
The issue is in the polynomial case, the effect size of one genetic variant depends on the status of other genetic variants within the same term in the sum. Statistics gives you a sort of average effect size, but that average effect size is only going to be accurate for the people with the most common kind of depression.