I am not sure I am convinced by this argument, for the following reasons:
If you think of calorie content / thermodynamics as an upper bound on how much energy can be extracted from the food, you have to make an argument for what happens to the unused energy. Even if you are in a biochemical state where not all the energy is used, there is still energy floating around in your body in the form of carbohydrates, fat and protein. I can think of three possible mechanisms for what happens to this extra energy, and I am not convinced by any of them:
(1) Calories are excreted unused in their original form. However, I don’t think this happens to a meaningful extent
(2) If there is excess fat, nutrients are broken down to molecular constituents in a less efficient mechanism of cellular metabolism, ie, producing less ATP. This is a little more plausible than 1, but I think it would be evolutionary maladaptive to reduce the fuel efficiency of your engine unless it was absolutely necessary. Note that there are cases when the body does reduce the fuel efficiency (such as anaerobic metabolism), but I can’t see how this applies here
(3) (Added): If there is excess fat, the body begins to run processes that are not strictly necessary, thus using more fuel. However, I am not sure what these processes would be, or why they would be triggered by fat and not carbohydrates.
I find it plausible that increasing fat intake will help you lose weight due to regulatory pathways such as insulin, but I think this pathway operates almost exclusively through changes in appetite. I fail to see any arguments why we cannot use thermodynamics (calorie input/output) as a very good approximation of predicted weight change.
EDIT: This comment is being downvoted. I am happy to delete it if it doesn’t add to the discussion, but it would help me immensely if someone could explain why my reasoning is wrong...
EDIT2: I am not sure if I misunderstand the karma system, but I don’t think you are supposed to downvote someone for disagreeing with their conclusions. It is possible that I am wrong in my conclusions, but I don’t think this in itself is reason for downvoting.
If you disagree with my arguments, you can dissect them in the comments. Reasonable arguments with incorrect conclusions are still valuable in a discussion, and if you show why they are wrong, you will not only help me update my priors, but also help reveal a flaw in how non-trolls come to their beliefs. Hiding the comment prevents this. I don’t see any reason for downvoting, and I think the downvoters need to ask themselves if they are downvoting due to mood affiliation / cognitive bias.
By which mechanism do these nutrients get excreted? Urine? Bile? Non-absorption?
My impression is that carbohydrates in urine is something that we only see to a significant extent when blood glucose concentration is at diabetic levels. Protein and fat in urine occurs, but it doesn’t seem to me that this happens to an extent where it can make a difference to the total energy picture
I don’t think excreting them through bile would work, the nutrients would just be reabsorbed further down the gastrointestinal tract.
It is possible that at very high intake levels, there is significant non-absorption of fat. Maybe this happens in competitive eaters, but I am not convinced it can explain much at fat intake levels seen in ordinary people..